Assistant Professor of Physics and Astronomy and Adjunct Assistant Professor of Biological Sciences
Molecular Motors, Biophysics
Eukaryotic cells depend on long distance directed transport for survival and function. At the core of these processes are molecular motors like dynein and kinesin – the ATPases which convert chemical energy into mechanical work. Arguably, more is known about kinesins than dyneins, yet both types of motors continue to present fundamental challenges to our understanding and modeling. Worse, little is understood about how these motors are regulated in cells. One would not dream of driving a car without first studying the road signs yet this type of regulation is exactly what we do not understand at the moment about molecular motors (with a few notable exceptions). One of the key reasons why progress is slow is that regulatory processes are highly coupled. This is especially true for molecular motor-based transport since it is facilitating so many other pathways and is thus subject to a wide range of feedback mechanisms. Isolating individual regulatory influences in living cells is too often too great of a challenge.
My group puts the spotlight on individual regulators of transport via in vitro experiments where all reagents can be added in carefully controlled amounts and in a desired sequence under well-defined environmental conditions. We can thus start with single molecule biophysics research and dial in complexity to go from a simple well-understood system to a complex assay as need be. Our key experimental techniques are optical trapping and fluorescence studies. These allow us to measure all the key parameters of motor performance such as binding, speed, and force production with exquisite sensitivity (often the measurables are nano- and pico- scale quantities). These tools also help us set up the experiments themselves.
My work generally integrates a strong collaborative effort between biochemists, molecular biologists, biophysicists, and computer scientists, including our most recent and continuing work on SARS-CoV-2). This is because in the most general sense, I am interested in how biological complexity arises from more basic parts. We work at the interface of multiple disciplines and my lab strives to bring together multiple scientific cultures and approaches as necessary.
- Sharma A, Preece B, Fan X, McKenney RJ, Ori-McKenney KM, Saffarian S, Vershinin M. (2021) “Structural stability of SARS-CoV-2 virus like particles degrades with temperature”, 534:343-346, Biochem Biophys Res Commun.
- Swann H*, Sharma A*, Preece B, Peterson A, Eldridge C, Belnap DM, Vershinin M ϯ, Saffarian S ϯ. (2020) "Minimal system for assembly of SARS-CoV-2 virus like particles", 10:21877, Sci. Rep. *Co-primary authors, ϯCo-senior authors .
- Sharma A, Vershinin M (2020) “Length dependence of the rigidity of microtubules in small networks”, Biochem Biophys Res Commun., 529: 303-305.
- Doval F, Chiba K, McKenney RJ, Ori-McKenney KM, Vershinin M. (2020) “Temperature-dependent activity of kinesins is regulable”, Biochem Biophys Res Commun., 528: 528-530.
- Nguyen HC, Talledge N, McCullough J, Sharma A, Moss III FR, Iwasa JH, Vershinin M, Sundquist WI, Frost A. (2020) “Membrane constriction and thinning by sequential ESCRT-III polymerization”, Nat Struct Mol Biol 27(4):392-399.
- Scherer J, Hogue IB, Yaffe ZA, Tanneti NS, Winer BY, Vershinin M, Enquist LW. (2020) "A Kinesin-3 Recruitment Complex Facilitates Axonal Sorting of Enveloped Alpha Herpesvirus Capsids", PLOS Pathogens 16(1):e1007985.
- Tan R, Lam A, Tan T, Han J, Nowakowski DW, Vershinin M, Simo S, Ori-McKenney KM,McKenney RJ. (2019) "Microtubules gate tau condensation to spatially regulate microtubule functions", Nat Cell Biol. 21(9):1078-1085.
- Osunbayo O, Miles CE, Doval F, Reddy BJN, Keener JP, Vershinin M. (2019) “Complex nearly immotile behaviour of enzymatically driven cargos”, Soft Matter 15(8):1847-1852.
- Bergman JP, Bovyn MJ, Doval FF, Sharma A, Gudheti MV, Gross SP, Allard JF, Vershinin M. (2018) "Cargo navigation across 3D microtubule intersections. Proc Natl Acad Sci U S A.115(3):537-542.
- Chase K, Doval F, Vershinin M. (2017) "Enhanced stability of kinesin-1 as a function of temperature."Biochem Biophys Res Commun. 493(3):1318-1321.
- Hong W, Takshak A, Osunbayo O, Kunwar A, Vershinin M. (2016) " The Effect of Temperature on Microtubule-Based Transport by Cytoplasmic Dynein and Kinesin-1 Motors." Biophys J.111(8):1816.
- Bergman J, Osunbayo O, Vershinin M. (2015) "Constructing 3D microtubule networks using holographic optical trapping." Sci Rep. 5:18085.
- Osunbayo O, Butterfield J, Bergman J, Mershon L, Rodionov V, Vershinin M. (2015) "Cargo transport at microtubule crossings: evidence for prolonged tug-of-war between kinesin motors." Biophys J 108:1480-3.
- Butterfield J, Hong W, Mershon L, Vershinin M. (2013) “Construction of a high resolution microscope with conventional and holographic optical trapping capabilities.” J Vis Exp 22:74.
- Smith TE, Hong W, Zachariah MM, Harper MK, Matainaho TK, Van Wagoner RM, Ireland CM, Vershinin M. (2013) “Single-molecule inhibition of human kinesin by adociasulfate-13 and -14 from the sponge Cladocroce aculeata.” Proc Natl Acad Sci U S A 110:18880-5.
- Yi JY, Ori-McKenney K, McKenney RJ, Vershinin M, Gross SP, Vallee RB (2011) "High-resolution imaging reveals indirect coordination of opposite motors and a role for LIS1 in high-load axonal transport.” J Cell Biol 195:193-201.
- Kunwar A†, Tripathy SK†, Xu J, Mattson MK, Anand P, Sigua R, Vershinin M, McKenney RJ, Yu CC, Mogilner A‡, Gross SP‡ (2011) “Mechanical Stochastic Tug-of-war Models Cannot Explain Bi-directional Lipid droplet Transport.” Proc Natl Acad Sci U S A 108:18960-5.(†co-primary authors. ‡co-senior authors)
- McKenney RJ*, Vershinin M*, Kunwar A, Vallee RB**, Gross SP** (2010) “LIS1 and NudE induce a persistent dynein force-producing state.” Cell 141:304-14. (*co-primary authors; **co-senior authors)
- Bremner KH, Scherer J, Yi J, Vershinin M, Gross SP, Vallee RB (2009) “Adenovirus transport via direct interaction of cytoplasmic dynein with the viral capsid hexon subunit.” Cell Host Microbe 6:523-35.
- Ziebert F, Vershinin M, Gross SP, Aranson IS (2009) “Collective alignment of polar filaments by molecular motors.” Eur Phys J E Soft Matter 28:401-9.
- Shubeita GT*, Tran SL*, Xu J, Vershinin M, Cermelli S, Cotton SL, Welte MA**, Gross SP** (2008) “Consequences of motor copy number on the intracellular transport of kinesin-1-driven lipid droplets.” Cell 135:1098-107. *co-primary authors; **co-senior authors
- Kunwar A, Vershinin M, Xu J, Gross SP (2008) “Stepping, strain gating, and an unexpected force-velocity curve for multiple-motor-based transport.” Curr Biol 18:1173-83.
- Vershinin M*, Xu J*, Razafsky DS, King SJ, Gross SP (2008) “Tuning microtubule-based transport through filamentous MAPs: the problem of dynein.” Traffic 9:882-92. *co-primary authors
- Carter BC, Vershinin M, Gross SP (2008) “A comparison of step-detection methods: how well can you do?” Biophys J 94:306-19.